PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW33993.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 285aa MW: 32254.2 Da PI: 6.2598 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.5 | 8.5e-10 | 23 | 54 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 rg+WT++Ed++l ++v+ +G g+W+ ar+ g RWW33993.1 23 RGPWTADEDLILMNYVTAHGEGRWNFLARCAG 54 89***************************999 PP | |||||||
2 | Myb_DNA-binding | 54.6 | 2.5e-17 | 99 | 142 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+++++ +lG++ W++Iar+++ gRt++++k++w++ RWW33993.1 99 RGNITPEEQLLILELHFRLGNR-WSKIARHLP-GRTDNEIKNYWRT 142 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MEFQGRACGS ATPPSEEEME LRRGPWTADE DLILMNYVTA HGEGRWNFLA RCAGAHFLSS 60 RNAEQEEENI ELDEVIGFSS ISKSCRLRWL NYLRPDVRRG NITPEEQLLI LELHFRLGNR 120 WSKIARHLPG RTDNEIKNYW RTRVQKQAKQ LRCDVNSKQF RDILRSIWMP RLVERIREAS 180 SGSAATAMHQ NAAAPLAPTR PVHRAAEPPP TMAYSFEAQL SSPPASESVT ESRGIQGVGL 240 DWMQGAQPPS PGGYAFSGLP DVDQSGWGDT LWSVEDIWLQ QQQQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47190.1 | 2e-72 | MYB family protein |