PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW33202.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 180aa MW: 21260.2 Da PI: 9.6322 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.8 | 1.1e-17 | 4 | 49 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g W + Ed +l ++v+++G+++W++Ia++++ gR++k+c++rw++ RWW33202.1 4 KGHWRPAEDAKLTELVAKYGPHNWNAIAEMLQ-GRSGKSCRLRWYNQ 49 789*****************************.************96 PP | |||||||
2 | Myb_DNA-binding | 56.4 | 7e-18 | 56 | 99 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eEd ll+ a++ +G++ W+ Iar ++ gRt++ +k++w+ RWW33202.1 56 KNPFTEEEDALLLAAHQIYGNR-WAIIARLFP-GRTDNAVKNHWHV 99 689*******************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 180 aa Download sequence |
MCTKGHWRPA EDAKLTELVA KYGPHNWNAI AEMLQGRSGK SCRLRWYNQL DPRINKNPFT 60 EEEDALLLAA HQIYGNRWAI IARLFPGRTD NAVKNHWHVI MARKHKERSR LPGNFVDEEQ 120 SHRCKKRKLE PTNTASMIEE YDRTSLKVHH SQHEDSLLDM YEGNIFYRCF HRKHLCNKAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G17950.1 | 7e-66 | MYB family protein |