PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW32121.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 247aa MW: 27095.3 Da PI: 6.23 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.8 | 3.4e-10 | 6 | 35 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 rg+WT eEd+ lv++v+++G g+W++ ar RWW32121.1 6 RGPWTLEEDLVLVNYVTEHGDGQWNALARL 35 89************************9996 PP | |||||||
2 | Myb_DNA-binding | 30.5 | 8.6e-10 | 78 | 100 | 22 | 46 |
T-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46 + W++Iar+++ gRt++++k++w++ RWW32121.1 78 R-WSKIARCLP-GRTDNEIKNYWRT 100 5.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MEELRRGPWT LEEDLVLVNY VTEHGDGQWN ALARLAAAPH PRAPISLGKS VTFTLSHGAI 60 LRMSTFTSHM LVAASINRWS KIARCLPGRT DNEIKNYWRT RVQKHAKQLR CDANSKTFRD 120 ATQHLLTPRL LERIRAASGS APSADPPPHS LSQPLPPFPG TMAAVSSSST STSEEDSLLT 180 QFSSFTTVQG GEMIHFDEQV LDVHGATGAG WTESPSTCPT NYGDFEQGGW ASADLLSGDY 240 MWSIEDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 5e-39 | MYB family protein |