PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW30778.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB
Protein Properties Length: 319aa    MW: 35121.6 Da    PI: 7.3593
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW30778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.99.8e-131464146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     rg WT eEd +l+ +++q+G+++W++I++  g      +R +kq ++r+++
       RWW30778.1 14 RGQWTLEEDNKLASYIAQHGTRNWRLIPKNAGnhrqaPRRRGKQARLRYHS 64
                     89***********************************99*****9999985 PP
2Myb_DNA-binding26.91.1e-08841062346
                      -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  23 tWktIartmgkgRtlkqcksrwqk 46 
                      +W++Ia  ++ gRt++++k++w++
       RWW30778.1  84 RWSLIAGQLP-GRTDNDVKNHWNT 106
                      6*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MGRIPCCERE NVKRGQWTLE EDNKLASYIA QHGTRNWRLI PKNAGNHRQA PRRRGKQARL  60
RYHSRMTACF DTMTERRFVA DVIRWSLIAG QLPGRTDNDV KNHWNTKLKK KLSGMGIDPV  120
THKPFSHLMA EIATTLAPPQ VAHLAEAALG CFKDEMLHLL TKKRTDFASA PAAITGNAYT  180
PERTGGGKEE TIEKIKLGLS KAIMHDPDAD KVWTMMASAG EPSDGLAGLE ETYPTLNEGF  240
RYDGPSYGNE GEGSAWSQST CTGGAAARRG GGLHDKVEDD NGEEAEGGKA EHKVNAAGMF  300
TSECVLWDLP DDLMIHPIV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15157PRRRGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.14e-83MYB family protein