PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW30021.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | C3H | ||||||||
Protein Properties | Length: 233aa MW: 26090.8 Da PI: 8.4861 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 31.1 | 4e-10 | 78 | 99 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 +C+ f++tG C++G +C FaHg RWW30021.1 78 PCPEFRQTGACRRGQKCEFAHG 99 7********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MNYENPSLVL PCYLQLSEAA RLAYGVTKAE LDDFLMYEFK VKRCAKAYPH QWMTCPFAHR 60 GEKARRRDPR RFPNHGIPCP EFRQTGACRR GQKCEFAHGV FEFWLHPTRY RTRMCISGPA 120 CRRKICFFAH TVDELRPEGL GEGGGGVPAG VGKLAEGTSA GRPEERGEEF AEPDLRLQRL 180 VCADVDEAST ASTGGSGMWA LLLVYRYSSP RAMPKAISCS VSHPNHTSFL DLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25900.2 | 4e-47 | C3H family protein |