PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW28717.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ZF-HD | ||||||||
Protein Properties | Length: 252aa MW: 27135.4 Da PI: 9.247 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 56.7 | 5.5e-18 | 140 | 176 | 3 | 40 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaa 40 v+Y+eC kNhAas+Gg a+DGCgEfmps geegt+ a RWW28717.1 140 VVKYRECHKNHAASIGGSATDGCGEFMPS-GEEGTPPA 176 689*************************9.77777654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MSKRESVGRR SDGGAAVRAT GAWWIGSGWE LGLGFGPWSR GSSAAGTGAA IDVERERAAC 60 GRPWADPFAF SKPWEEGQPS MPAAWSEVVG FALSQVVNHS ALLLHDSSAY VGDHGHNGPP 120 LSVVVTTEDH HHHGEKGEVV VKYRECHKNH AASIGGSATD GCGEFMPSGE EGTPPAAATG 180 KRQKASPRVT ASAQPGLPHT QQKEKMLSFA EKVGWRRLQK QEEIGVKRRV LKVWWMHNNK 240 HNLAGKASLQ LE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 5e-20 | ZF-HD family protein |