PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW27919.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 343aa MW: 39745.6 Da PI: 10.3796

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW27919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.9	6.5e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd +l +vkq+G++ W++++++m+ + R +k+c +rw +yl RWW27919.1 4 RQRWRAEEDAILRAYVKQYGPREWHLVSQRMNvtLDRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.5	1.1e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + RWW27919.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEIP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999776 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MKDRQRWRAE EDAILRAYVK QYGPREWHLV SQRMNVTLDR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIAAEIPG RTAKRLGKWW EVFREKQQRE QRGSNNSRAA 120 TAEPGKYDRI LESFAEKLVK EQRAVPLLMA TPFLPPWLSN NAGSRRPPSP SVTLTLSPST 180 VPPAPKPWPQ PERGRDGGLG LTTSQRSVVP GFPSSVDSSN MMSELVDCCR ELEEGHRAWM 240 EHKKEAAWRL KRLELQLESE KACKRREKME EIEAKVRALR EEQQVVLERI EAEYKEQIAG 300 LRKDAEAKEQ KLAEQWAAKH VRLSKFLEQV GCRQWPPADM NGR

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MKDRQRWRAE EDAILRAYVK QYGPREWHLV SQRMNVTLDR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIAAEIPG RTAKRLGKWW EVFREKQQRE QRGSNNSRAA  120
TAEPGKYDRI LESFAEKLVK EQRAVPLLMA TPFLPPWLSN NAGSRRPPSP SVTLTLSPST  180
VPPAPKPWPQ PERGRDGGLG LTTSQRSVVP GFPSSVDSSN MMSELVDCCR ELEEGHRAWM  240
EHKKEAAWRL KRLELQLESE KACKRREKME EIEAKVRALR EEQQVVLERI EAEYKEQIAG  300
LRKDAEAKEQ KLAEQWAAKH VRLSKFLEQV GCRQWPPADM NGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-141	MYB family protein