PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW26909.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 376aa MW: 40858.6 Da PI: 8.8174

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW26909.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.7	1.2e-09	279	326	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq RWW26909.1 279 SHSLAERVRREKISQRMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 326 8***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MYRGPPDQLP SCLLDLNWEQ TMESTGHFES ALSSVDGMGV HKLVGGHHVG VRLNSPPRPN 60 LSMVGHFHQP QQAMGGLPPS GTPMPLTHLD QFSADLGRFS SFDGRNYGHL ATRFGLLDTE 120 SLSRTAGSQS PQTSRLPIGR EIPAQNRLQS DVNNGESMNA REESSVSDPA SREVSLGAPA 180 WSSEKKRKAP PKGKAKEVGL ANSAMDPPKV AEEDAKRCRS NEKDGNEDDA VKPKVEQTDG 240 SSSNGNGGQK QGRNTAAKSP EPPKDYIHVR ARRGQATDSH SLAERVRREK ISQRMKLLQD 300 LVPGCSKVTG KAVMLDEIIN YVQSLQRQVE VRSSQTKVDQ FVSELHLRLV ALAVSFHEAG 360 HGESTLGHQQ FGKSPS

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MYRGPPDQLP SCLLDLNWEQ TMESTGHFES ALSSVDGMGV HKLVGGHHVG VRLNSPPRPN  60
LSMVGHFHQP QQAMGGLPPS GTPMPLTHLD QFSADLGRFS SFDGRNYGHL ATRFGLLDTE  120
SLSRTAGSQS PQTSRLPIGR EIPAQNRLQS DVNNGESMNA REESSVSDPA SREVSLGAPA  180
WSSEKKRKAP PKGKAKEVGL ANSAMDPPKV AEEDAKRCRS NEKDGNEDDA VKPKVEQTDG  240
SSSNGNGGQK QGRNTAAKSP EPPKDYIHVR ARRGQATDSH SLAERVRREK ISQRMKLLQD  300
LVPGCSKVTG KAVMLDEIIN YVQSLQRQVE VRSSQTKVDQ FVSELHLRLV ALAVSFHEAG  360
HGESTLGHQQ FGKSPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48560.1	1e-41	bHLH family protein