PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW26756.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 98aa    MW: 11108 Da    PI: 10.5252
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW26756.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.61.6e-28959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien + rqvtfskRrng+lKKA ELSvLCdae+ +iifs +gkly+++s
  RWW26756.1  9 KRIENATSRQVTFSKRRNGLLKKALELSVLCDAEIGLIIFSARGKLYDFAS 59
                79***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MVRGKTQLKR IENATSRQVT FSKRRNGLLK KALELSVLCD AEIGLIIFSA RGKLYDFASS  60
RSCFSSILFS YFSLYCSLLP HDRPPKPATF FELKNLVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.18e-31MIKC_MADS family protein