PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW26606.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 403aa MW: 44023.9 Da PI: 9.0198

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW26606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.1	3.6e-19	25	77	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++++eq+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k RWW26606.1 25 KRRLSAEQVRALEKNFEVDNKLEPERKVRLAQELGLQPRQVAVWFQNRRARWK 77 5589************************************************9 PP
2	HD-ZIP_I/II	130.6	6e-42	24	114	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kkrrls+eqv++LE++Fe ++kLeperKv+la+eLglqprqvavWFqnrRAR+ktk+lE+dy+aLk++ydal+ + ++L++++e+L +e++ RWW26606.1 24 KKRRLSAEQVRALEKNFEVDNKLEPERKVRLAQELGLQPRQVAVWFQNRRARWKTKHLEHDYAALKASYDALRLDYDALRRDNESLVAEVS 114 9*************************************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MDGLEDDDGV EQEEMCNGGP RGVKKRRLSA EQVRALEKNF EVDNKLEPER KVRLAQELGL 60 QPRQVAVWFQ NRRARWKTKH LEHDYAALKA SYDALRLDYD ALRRDNESLV AEVSWLIKRS 120 LSAYKQTNDR LNSLMMLMVA QIKELKTKLT ASDKEEAMTS KAEQKAAAPE EPLAKDGSSD 180 SDSSAVLLND QDSPRGRSSP AWASNIPSAA GIGHGSSSSF PGSPPPLLNL DLRTMKTIGG 240 LNHQNHVMKT EELLDGDEPC SSGLYQVLAG PSPRKGGVVG SRRSPSPTPN IAHGHEIVTR 300 RPKGRGLSRV GSPCHINKRG KAGGKQRDTQ GEDGTGDRSY VAQLLVSAKR LPPQATSLLP 360 SSTSSCACLL ACFVEIMVSQ GTPLWFLPIA SKSKIEHVDC KLM

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MDGLEDDDGV EQEEMCNGGP RGVKKRRLSA EQVRALEKNF EVDNKLEPER KVRLAQELGL  60
QPRQVAVWFQ NRRARWKTKH LEHDYAALKA SYDALRLDYD ALRRDNESLV AEVSWLIKRS  120
LSAYKQTNDR LNSLMMLMVA QIKELKTKLT ASDKEEAMTS KAEQKAAAPE EPLAKDGSSD  180
SDSSAVLLND QDSPRGRSSP AWASNIPSAA GIGHGSSSSF PGSPPPLLNL DLRTMKTIGG  240
LNHQNHVMKT EELLDGDEPC SSGLYQVLAG PSPRKGGVVG SRRSPSPTPN IAHGHEIVTR  300
RPKGRGLSRV GSPCHINKRG KAGGKQRDTQ GEDGTGDRSY VAQLLVSAKR LPPQATSLLP  360
SSTSSCACLL ACFVEIMVSQ GTPLWFLPIA SKSKIEHVDC KLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22430.1	3e-44	HD-ZIP family protein