PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW26131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 255aa MW: 28538.7 Da PI: 10.3074 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.5 | 1.1e-18 | 91 | 150 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++ +eq++ Le+l++ r+p+ ++e+++++l +++ ++V++WFqN++a+e++ RWW26131.1 91 TRWNPMPEQIKLLEALYQGgMRTPNPVQIERITAELgkygRIEGKNVFYWFQNHKARERQ 150 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 113.6 | 9.8e-37 | 91 | 152 | 4 | 65 |
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+P peQik+Le+ly+ G+rtPn +i+ritaeL +yG+ie+kNVfyWFQN+kaRerqkq RWW26131.1 91 TRWNPMPEQIKLLEALYQGGMRTPNPVQIERITAELGKYGRIEGKNVFYWFQNHKARERQKQ 152 8***********************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 255 aa Download sequence |
MKVHQLTLGL WGEQLPSSPS TSSSLSSSCT NHHNKRLRTF APKLSSSAVV STTTMAEIIS 60 LKSFNSPLTT KFASRNVDAS LMQLQLQSGG TRWNPMPEQI KLLEALYQGG MRTPNPVQIE 120 RITAELGKYG RIEGKNVFYW FQNHKARERQ KQKRSALLAL AANSASLPDL LKVRRKHGFS 180 PHAHFVNRVT CEDLGLCRSC MMVQLQGEEM KELHGGSVKR KCRSWGSLEP DVEDSGPGDR 240 TLELFPLHPE WKQVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G46480.1 | 2e-41 | WOX family protein |