PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW25246.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 299aa MW: 33469.4 Da PI: 5.8976 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.3 | 1.3e-11 | 20 | 56 | 1 | 33 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT....T CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg....k 33 rg+WT+eEd++lv++v+ +G ++W+t +++ g + RWW25246.1 20 RGAWTAEEDQKLVEYVRDHGDKNWRTLPAKAGpfssL 56 89**************************999866552 PP | |||||||
2 | Myb_DNA-binding | 54.2 | 3.3e-17 | 113 | 158 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWW25246.1 113 RGNISDEEEDLIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNHWNTHL 158 7899******************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 299 aa Download sequence |
MVKKTERAKQ KAAADIVVNR GAWTAEEDQK LVEYVRDHGD KNWRTLPAKA GPFSSLSLSL 60 SLSHTHTHTH THTQRKPKKT PFHQAKFLLA GLNRCGKSCR LRWLNYLRPG IKRGNISDEE 120 EDLIIRLHNL LGNRWSLIAG RLPGRTDNEI KNHWNTHLSR RPVTIDDLNL KLNQQMEGGR 180 EGGALVSPVT SSRDLTTLVD HVEDEWVLDG TAELLHHSEL DMDQLFDLMP NPDGGSEFGA 240 EADGSGGEEG YRDVKEGEIS GAKAEGCPDA QAAAWDASAF DVDLERFMGY DDLAFYFMD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G09460.1 | 8e-47 | MYB family protein |