PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW24979.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 369aa MW: 39790.6 Da PI: 7.0729

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW24979.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.5	3.7e-19	18	63	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v+++G+++W++I++ ++ gR++k+c++rw + RWW24979.1 18 KGPWSPEEDDALQQLVQRHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 63 79****************************.*********985 PP
2	Myb_DNA-binding	54.3	3.2e-17	72	114	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T++Ede +++a++++G++ W+tIar + gRt++ +k++w++ RWW24979.1 72 PFTPDEDETIIRAHRRFGNK-WATIARLLS-GRTDNAVKNHWNST 114 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MAAAAAVGSR SKDVDRIKGP WSPEEDDALQ QLVQRHGPRN WSLISKSIPG RSGKSCRLRW 60 CNQLSPQVEH RPFTPDEDET IIRAHRRFGN KWATIARLLS GRTDNAVKNH WNSTLKRRNS 120 AAAAVAVDDG FVAAAEIEPM PERPLKRTCS DGPLLSSDGA GLCLSPGSPS ESDLSVSSDH 180 SLPMISPVST ASHIYRPVPR TGSVVLPSSS SSAPNHHHPT EPSAAATATS CSPEIVEDPV 240 TSLTLSLPGS DPMNNCNDPH IADNDGSNQK PLELLPSVPT PLQSRPPSST TRSAEATGPA 300 ARCEEEQGWH APCPFAAEFL AAMQELIRKE VRSYMSSLEQ SGMMCTRFPL PPESVRNAGI 360 RRIGITRIE

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MAAAAAVGSR SKDVDRIKGP WSPEEDDALQ QLVQRHGPRN WSLISKSIPG RSGKSCRLRW  60
CNQLSPQVEH RPFTPDEDET IIRAHRRFGN KWATIARLLS GRTDNAVKNH WNSTLKRRNS  120
AAAAVAVDDG FVAAAEIEPM PERPLKRTCS DGPLLSSDGA GLCLSPGSPS ESDLSVSSDH  180
SLPMISPVST ASHIYRPVPR TGSVVLPSSS SSAPNHHHPT EPSAAATATS CSPEIVEDPV  240
TSLTLSLPGS DPMNNCNDPH IADNDGSNQK PLELLPSVPT PLQSRPPSST TRSAEATGPA  300
ARCEEEQGWH APCPFAAEFL AAMQELIRKE VRSYMSSLEQ SGMMCTRFPL PPESVRNAGI  360
RRIGITRIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	5e-73	MYB family protein