PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW24608.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WOX | ||||||||
Protein Properties | Length: 108aa MW: 12072.6 Da PI: 5.8563 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 17.1 | 9.2e-06 | 55 | 91 | 2 | 37 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl 37 r+R+t+ +eq +Le+ F++ +++++e +++ + l RWW24608.1 55 RTRWTPDAEQMLILESIFNSgLVNLTKDETARIRRLL 91 89*****************99******9999997765 PP | |||||||
2 | Wus_type_Homeobox | 48.3 | 2.5e-16 | 54 | 99 | 2 | 47 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkied 47 +rtRWtP +eQ+ iLe++++sGl++ +k+e+ ri++ Le++G+ ++ RWW24608.1 54 VRTRWTPDAEQMLILESIFNSGLVNLTKDETARIRRLLEQFGRQRQ 99 689***************************************9665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 108 aa Download sequence |
MSITGSATLL KYEEASISLV VYSSTSTMED SNRGHSNSST LQRSAPDGTV PGPVRTRWTP 60 DAEQMLILES IFNSGLVNLT KDETARIRRL LEQFGRQRQL QTLLWVTE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17810.1 | 3e-19 | WOX family protein |