PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW23828.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 301aa MW: 34536.6 Da PI: 6.868 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.3 | 8.4e-19 | 42 | 89 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ll ++v ++G g+W++ ar+ g++Rt+k+c++rw++yl RWW23828.1 42 KGSWTVEEDLLLMNYVSEHGEGRWDSLAREAGLKRTGKSCRLRWLNYL 89 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 30.6 | 7.7e-10 | 121 | 144 | 22 | 46 |
T-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46 ++W++Ia++++ gRt++++k++w++ RWW23828.1 121 RRWSKIAQHLP-GRTDNEIKNYWRT 144 47*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MHRTSPVPVI YSSNSIRARF QYTQVMEFNG RARGEDEVEL KKGSWTVEED LLLMNYVSEH 60 GEGRWDSLAR EAGLKRTGKS CRLRWLNYLR PDLRPAVFTG SPDNHVFPLS LVLNRAPWLS 120 RRWSKIAQHL PGRTDNEIKN YWRTRVQKHA KQLRCEVDSK RFKDVVRHLW IPRLVERIRA 180 ASGSSAVSTH QSVNDPSACK RPEEGDVEFG EAKIASPESS NMVRSSSESS EVQVSTASVS 240 DRFTNCDDAW FQETTGFSAC WPETLPSPGA CDSWGWSMDL DQSGWEENLW SMEDIWLQQQ 300 I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 3e-63 | MYB family protein |