PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW22901.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 26279 Da PI: 4.6092 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.9 | 0.00042 | 170 | 206 | 13 | 54 |
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 Rd++++ Lr ++P + ++ a +L +Av+Y+ksL RWW22901.1 170 RDKMKKMVKVLRGIIPGgD------QMDTAVVLDEAVRYLKSL 206 79**************955......8***************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MHGDPRYFAG NVPPAHPYEV GGYTYNIYTN GPGRKYEIPG AFSRFKHQLS ETCPKNFIFD 60 QMDNTNRVMS HPALAHEFGS SNFHVCAARV EEYGKIMGRN TDEDTEDINA LLSSEEENDE 120 DDIVSTGRTP IYNQDDNLPD SPCFMEDLEC YTLGSASSHK STLNSADRKR DKMKKMVKVL 180 RGIIPGGDQM DTAVVLDEAV RYLKSLKSEV EKLGIQDLDD QIHGNSDDPS STAKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.1 | 2e-16 | bHLH family protein |