PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW22807.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NF-YC

Protein Properties

Length: 472aa MW: 53163.5 Da PI: 6.9318

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW22807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	24.8	4.7e-08	22	96	25	98
NF-YC 25 rikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaav.trtdifdflvdivpr 98 ++kki+k d +++++++ea l+ + + f+ lt + ++a ++krr +k + +a ++ + +fl+d p+ RWW22807.1 22 KVKKIVKLDREISKVTSEALLLIYLSADHFLAYLTAGARIEALKKKRRIIKLEHVRSAArAHRPTSQFLLDCLPK 96 79**************************************************9765516677999**9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MEATRDDRER RQAHGERGGG GKVKKIVKLD REISKVTSEA LLLIYLSADH FLAYLTAGAR 60 IEALKKKRRI IKLEHVRSAA RAHRPTSQFL LDCLPKPPPP ASKPASGASK ARSADEKPLP 120 PGARRIDDFL RSTSAVPQCR LRVVSAANGV TGGVTSSVVL PDTHARSVFW PKIVLKKWLN 180 IRANDSEFSA DEGGNDSDLE EDEGGDDNLE SIPYKLRRRN SETLRSQYIN TKELRHVHLV 240 FLPSEDVHFT VDELLSETNS DTDDDDEIST SLVDSKGPVA SYFVHGESNI RQDLDQDMPP 300 TIKRLHRLNH FTSFDYDVNS AASTIQEKKL LRTLSTSERI GLIWPEQPLD LTMTWVVLRC 360 DRILWFGKGV RLLDYKRAEL MMLSDHRPVT AVLMAEVEVF CHRKLQKALT LTDAEVEDGD 420 TMPDVDFTLE MGLGDVSFLF PHIKFKNPKR KLFSHLVLVS KVNETVETIL PD

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MEATRDDRER RQAHGERGGG GKVKKIVKLD REISKVTSEA LLLIYLSADH FLAYLTAGAR  60
IEALKKKRRI IKLEHVRSAA RAHRPTSQFL LDCLPKPPPP ASKPASGASK ARSADEKPLP  120
PGARRIDDFL RSTSAVPQCR LRVVSAANGV TGGVTSSVVL PDTHARSVFW PKIVLKKWLN  180
IRANDSEFSA DEGGNDSDLE EDEGGDDNLE SIPYKLRRRN SETLRSQYIN TKELRHVHLV  240
FLPSEDVHFT VDELLSETNS DTDDDDEIST SLVDSKGPVA SYFVHGESNI RQDLDQDMPP  300
TIKRLHRLNH FTSFDYDVNS AASTIQEKKL LRTLSTSERI GLIWPEQPLD LTMTWVVLRC  360
DRILWFGKGV RLLDYKRAEL MMLSDHRPVT AVLMAEVEVF CHRKLQKALT LTDAEVEDGD  420
TMPDVDFTLE MGLGDVSFLF PHIKFKNPKR KLFSHLVLVS KVNETVETIL PD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	65	69	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43250.1	4e-15	NF-YC family protein