PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW22601.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 243aa MW: 27321.7 Da PI: 8.1302 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.7 | 3.1e-14 | 15 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqkyl 48 +g+WT++Ed+llv v+++G ++W+ a+ g ++Rt+k+c++rw +yl RWW22601.1 15 KGPWTEQEDLLLVWFVRLFGERRWDFLAKVSGlsggggcLNRTGKSCRLRWVNYL 69 79***************************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.5 | 6.2e-18 | 75 | 120 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+T++E+ l +++++++G++ W++Iar+++ gRt++++k++w++++ RWW22601.1 75 RGRMTPQEEHLVLELHAKWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 120 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MANAPQTGAA AATRKGPWTE QEDLLLVWFV RLFGERRWDF LAKVSGLSGG GGCLNRTGKS 60 CRLRWVNYLH PGLKRGRMTP QEEHLVLELH AKWGNRWSRI ARRLPGRTDN EIKNYWRTHM 120 RKKAQERRTS SAPSPSSSSS SNISELRTEK HEGCSTAEGT SLISGLEVND NEGKGYTMDQ 180 IWNEIAASES VSKLSFDEYK GGSACNMESP PVSSPIWEDC SASLWRMEDE DLCPMTDLLL 240 SNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 8e-78 | MYB family protein |