PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW21268.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 416aa MW: 44543.2 Da PI: 7.4816

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW21268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.6e-13	240	286	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+Er+RR+++N++f Lr+++P+ +++Ka+ L Av YI++L RWW21268.1 240 ASHVEAERQRREKLNHRFYALRSVVPNV-----SRMDKASLLADAVAYIQEL 286 589**********************6.....4**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MDEFIISPSS SSSCLHQPTA TALQHRLQRL LDTRPEWWAY AIFWRASPDH GLLSFGDGHF 60 RGARSVADRR SGADAVDDAE WFYALSLSRS FVVAGDATAV AAVPARVYSS LAPVWLAGAH 120 ALQACGCDRT REAQLHGIET LACVQVPGGV LELGSTDIIG ENWVVMQQAK AVFSTPPHDA 180 ALATGAAPTI ATAPSPAVRK DGAGHSSSVD SDSDGGLTLE HRRPKKRGRK TVSGTRQAPA 240 SHVEAERQRR EKLNHRFYAL RSVVPNVSRM DKASLLADAV AYIQELKAKV DKLEAEAKTA 300 TKEITVEQTA GHSADAGAAT SSTTTSATTP TCAKAAMEVE VKLLGAEALI RVQSEDRGHP 360 SARLMAALRD LELRVHHASV SSLEQVVLQD VVAKVPTELQ REDGLRAALL ARLDKH

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MDEFIISPSS SSSCLHQPTA TALQHRLQRL LDTRPEWWAY AIFWRASPDH GLLSFGDGHF  60
RGARSVADRR SGADAVDDAE WFYALSLSRS FVVAGDATAV AAVPARVYSS LAPVWLAGAH  120
ALQACGCDRT REAQLHGIET LACVQVPGGV LELGSTDIIG ENWVVMQQAK AVFSTPPHDA  180
ALATGAAPTI ATAPSPAVRK DGAGHSSSVD SDSDGGLTLE HRRPKKRGRK TVSGTRQAPA  240
SHVEAERQRR EKLNHRFYAL RSVVPNVSRM DKASLLADAV AYIQELKAKV DKLEAEAKTA  300
TKEITVEQTA GHSADAGAAT SSTTTSATTP TCAKAAMEVE VKLLGAEALI RVQSEDRGHP  360
SARLMAALRD LELRVHHASV SSLEQVVLQD VVAKVPTELQ REDGLRAALL ARLDKH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	222	230	RRPKKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-60	bHLH family protein