PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW21202.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GATA

Protein Properties

Length: 355aa MW: 37539.8 Da PI: 6.0134

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW21202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	53.7	2.9e-17	257	291	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C t kTp+WR gp g+ktLCnaCG++y++ +l RWW21202.1 257 CLHCLTDKTPQWRTGPMGPKTLCNACGVRYKSGRL 291 99*****************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MEAADHFHGG FCLAANPHCS PEKKAGGGGG GGAAGDRFVV EDLLDFSNEE EEEEDKAEVL 60 AGGGEDEGAA GGNSTDSSTV TAVDSCSNSF FGLEPHFSSD LVCRSFADAG LSGDLCEPLY 120 DELAELEWLS NFVEESSSED LHKLHLVSGV IPTASLCTTG AANRAEVSHD GGRTDQVAHF 180 RTEAPVPGKA RRKRSRSAPC SWSSRLLVLS SPLAAAAASS PESEFVGPPC DGGGKKAAKK 240 KDPPADPGLT VTDGRKCLHC LTDKTPQWRT GPMGPKTLCN ACGVRYKSGR LVPEYRPASS 300 PTFVVSKHSN SHRKVLELRR QKILQHQLHQ SAAPFDGPTP ASNFLIPGPD IRHLI

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MEAADHFHGG FCLAANPHCS PEKKAGGGGG GGAAGDRFVV EDLLDFSNEE EEEEDKAEVL  60
AGGGEDEGAA GGNSTDSSTV TAVDSCSNSF FGLEPHFSSD LVCRSFADAG LSGDLCEPLY  120
DELAELEWLS NFVEESSSED LHKLHLVSGV IPTASLCTTG AANRAEVSHD GGRTDQVAHF  180
RTEAPVPGKA RRKRSRSAPC SWSSRLLVLS SPLAAAAASS PESEFVGPPC DGGGKKAAKK  240
KDPPADPGLT VTDGRKCLHC LTDKTPQWRT GPMGPKTLCN ACGVRYKSGR LVPEYRPASS  300
PTFVVSKHSN SHRKVLELRR QKILQHQLHQ SAAPFDGPTP ASNFLIPGPD IRHLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32890.1	1e-55	GATA family protein