PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW20191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 246aa MW: 27124 Da PI: 4.6262 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.4 | 5.2e-16 | 14 | 93 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT..................................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..................................tWktIartmgkgRtlkqcksrwqky 47 +g+WT+eEd++l ++k++G+g W++Ia++++ Rt++++k++w+ + RWW20191.1 14 KGPWTPEEDLILFSYIKEHGPGkwndvpvktgdsiksycdslmnnitipvastsdyVWAAIASYLP-ERTDNDIKNHWNAH 93 79****************************************************************.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MSRPLDFETV GVKKGPWTPE EDLILFSYIK EHGPGKWNDV PVKTGDSIKS YCDSLMNNIT 60 IPVASTSDYV WAAIASYLPE RTDNDIKNHW NAHMKKKLRK LDADADVSKS GGSSKKHSDE 120 QSISRGQWER CLQTDLHKAK QALCEALSIE NPSSPSHSKF PSDASSNTPC ASSTDDMAGL 180 LQGWTTDDSP KPGDSSSSHL FAGSVSEVWE DQAPLVLFDP WFFDDSSAQG QEKLFGMAMD 240 ETAELF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62470.1 | 4e-42 | MYB family protein |