PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW20164.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 811aa MW: 88162.8 Da PI: 5.7661

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW20164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.6e-12	626	671	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L Av YI++L RWW20164.1 626 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAVSYINEL 671 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 811 aa Download sequence
MLPVVTDDIM ARRLKNRERQ RRYRARKRLE SDMKRFCLLG QHTALKSETQ VDFTTVQFDS 60 CEISFPSETN ANITAMTTKA CVYITDDLGI APGKGEGGDW NPGFPVHAQE LVPGVRSKER 120 MNLWGDDNAS MMEAFMASVD LPGFPWAVAP PTLTPPSAAA SSSLDHPAAA ATPAPAYFSQ 180 ETLQQRLQAL IEGARESWTY GIFWQSSVDA ATGGSFLGWG DGYYKGYEED KRKQRVAGAA 240 SAAEQEHRKR VLRELHSLIS GGGSSAPDEA VDEEVTDTEW FFLVSMTQSF IDGGGLPGQA 300 FYTGAPAWVT GADRLAAATC DRARQAQLFG LQTMVCVPVG SGVLELGSTD VVFHSPEIMG 360 KIRVLFNFSS PDAPPVASWL TPQSAAATPA TDQGETDPSV LWLTDPSAVD IKDSVSPVSA 420 TADLSVTKPP IQLENNPSSS ILTESPSSSM QIQRTHNQPQ QQLHQSSGSD PHTHLFFSKK 480 FNFSEFASNG SVVPQSAKPE PSDILDFAGG NRNPTPAPVT GSLFSHHQAI TAAADDKRNK 540 RSTGATSRVS DNDEGMISFS SAPARPPSDV LFKSSGGGGI LDGPDSDQSD LEASAREVES 600 IRPVEPEKRP KKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP NVSKMDKASL 660 LGDAVSYINE LRSKLETLEI DKEELRAQVE ALEKERESNP TRPVQPPPPD HDLRMMNGSG 720 GRCHGVEMEV KILGSEAMIR LQSLKRNHPA AKLMAALRDL DLDVHYASVS VVEDLMIQQA 780 TVKLSPGRAY TLEQLRAALH SKLAAEAPIS R

Sequence ? help Back to Top

Protein Sequence Length: 811 aa Download sequence

MLPVVTDDIM ARRLKNRERQ RRYRARKRLE SDMKRFCLLG QHTALKSETQ VDFTTVQFDS  60
CEISFPSETN ANITAMTTKA CVYITDDLGI APGKGEGGDW NPGFPVHAQE LVPGVRSKER  120
MNLWGDDNAS MMEAFMASVD LPGFPWAVAP PTLTPPSAAA SSSLDHPAAA ATPAPAYFSQ  180
ETLQQRLQAL IEGARESWTY GIFWQSSVDA ATGGSFLGWG DGYYKGYEED KRKQRVAGAA  240
SAAEQEHRKR VLRELHSLIS GGGSSAPDEA VDEEVTDTEW FFLVSMTQSF IDGGGLPGQA  300
FYTGAPAWVT GADRLAAATC DRARQAQLFG LQTMVCVPVG SGVLELGSTD VVFHSPEIMG  360
KIRVLFNFSS PDAPPVASWL TPQSAAATPA TDQGETDPSV LWLTDPSAVD IKDSVSPVSA  420
TADLSVTKPP IQLENNPSSS ILTESPSSSM QIQRTHNQPQ QQLHQSSGSD PHTHLFFSKK  480
FNFSEFASNG SVVPQSAKPE PSDILDFAGG NRNPTPAPVT GSLFSHHQAI TAAADDKRNK  540
RSTGATSRVS DNDEGMISFS SAPARPPSDV LFKSSGGGGI LDGPDSDQSD LEASAREVES  600
IRPVEPEKRP KKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP NVSKMDKASL  660
LGDAVSYINE LRSKLETLEI DKEELRAQVE ALEKERESNP TRPVQPPPPD HDLRMMNGSG  720
GRCHGVEMEV KILGSEAMIR LQSLKRNHPA AKLMAALRDL DLDVHYASVS VVEDLMIQQA  780
TVKLSPGRAY TLEQLRAALH SKLAAEAPIS R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	608	616	KRPKKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-145	bHLH family protein