PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW19385.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 368aa    MW: 40242.1 Da    PI: 7.8909
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW19385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH222.9e-07122145326
                 S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                  ++C++f++ G Ck+Gd C  aHg
  RWW19385.1 122 GAPCSDFRKAGGCKRGDACDLAHG 145
                 589****************88887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MIGRGVSHLN TTVHVPPWPP FDDPTAVTTF SSHFPLSGIA TGDGVLDEDA VAAMQLNLCL  60
EEGAGEDAPP VVDAYASDEF RMYEFKVRRC SRGRAHDWTE CPYAHPGEKA RRRDPRKHRY  120
SGAPCSDFRK AGGCKRGDAC DLAHGVFECW LHPERYRTQP CKDGTTCRRR VCFFAHTPDQ  180
LRLVPPQPQQ SFTSPAAASA ESYDGSPLRQ QPASQSYLSK NLVSSPASTL ISPPTSPPAK  240
SPPISPNGAK LRRDSWQQSS SANEIVASLR QLQLSRAKSM PSSWGLQTVN GGFASPRGSL  300
AGFNTVFCSL PSTPTVATAD WLEEEEPAER VESGRALRAK MFERLSKDSV FDKAEATPHV  360
GWVSDLLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-89C3H family protein