PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW18554.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB
Protein Properties Length: 262aa    MW: 29877.3 Da    PI: 9.1276
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW18554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.37.2e-181863147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G+++W++Ia++++ gR++k+c++rw++ 
       RWW18554.1 18 RGHWKPAEDEKLQQLVEQFGPHNWNSIAEKLQ-GRSGKSCRLRWFNQ 63
                     899*****************************.***********996 PP
2Myb_DNA-binding55.51.3e-1770113146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T+eE+e l+ a + +G++ W+tIa+ ++ gRt++++k++w+ 
       RWW18554.1  70 RSPFTAEEEESLLAAQRVHGNK-WATIAQLFP-GRTDNSVKNHWHV 113
                      789*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MESTTVSTGS GDKKACPRGH WKPAEDEKLQ QLVEQFGPHN WNSIAEKLQG RSGKSCRLRW  60
FNQLDPRINR SPFTAEEEES LLAAQRVHGN KWATIAQLFP GRTDNSVKNH WHVIMARRHR  120
ERLKLMRKRT YQDFTSQLTF EVGDGTNSTS IPASAFFGSK ILLVPQGYGS ERRNCSSFRC  180
SCCTYETSHL HDQSIRHCHQ TYRSLRAFED GHSKRAAAPN SKFSSEYDSC VDHAIRRGDD  240
NEQNERGKNV AFIDFLGVGI TQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117129RRHRERLKLMRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.13e-67MYB family protein