PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW17622.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | SRS | ||||||||
Protein Properties | Length: 329aa MW: 34086.7 Da PI: 7.7805 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 217.2 | 3.7e-67 | 92 | 260 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.....................aeaaskrkrelks 80 g++sCqdCGnqakkdC+h+RCR CCksrgf+C thvkstWvpaakrrerqqql+a+++ +++s+ + skr re RWW17622.1 92 GGGMSCQDCGNQAKKDCSHMRCRSCCKSRGFQCPTHVKSTWVPAAKRRERQQQLSATAALQQQSRrlqiggsttaaltrggggddsGGEPSKRAREI-- 188 5789************************************************999887777766668899888888877777543222333333332.. PP DUF702 81 kkqsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++ ++ t++ss+ + s+P+evss+avfrcvrvs +dd+e+e+aYqtavsigGhvf+GiLydqG+++ RWW17622.1 189 VTRLPTAITTTSSG--GDRTAGVSFPAEVSSPAVFRCVRVSPMDDAEDEFAYQTAVSIGGHVFRGILYDQGPDA 260 22333333333333..34456667************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MAGFSLGGGS RQGGGDEGIP PESLFLYGSG SGGGGGSRTE EITTYTRGFE LWQQHQHLYT 60 STTAGLLSFS DEPLHAGGTI GPTLSMRGSG GGGGMSCQDC GNQAKKDCSH MRCRSCCKSR 120 GFQCPTHVKS TWVPAAKRRE RQQQLSATAA LQQQSRRLQI GGSTTAALTR GGGGDDSGGE 180 PSKRAREIVT RLPTAITTTS SGGDRTAGVS FPAEVSSPAV FRCVRVSPMD DAEDEFAYQT 240 AVSIGGHVFR GILYDQGPDA QYPFHGDQPS SSTAAAAIAT ATAAAFATNL TAAPPTSSTA 300 GLLDPAALYP TPLSSFMAGT QFFPHHPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66350.1 | 4e-57 | SRS family protein |