PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW17237.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 318aa MW: 34705.6 Da PI: 4.9767 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.7 | 7.2e-10 | 14 | 41 | 1 | 28 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIa 28 +g+WT+eEd lv +++q+G+g+W+ I+ RWW17237.1 14 KGPWTPEEDIALVSYIQQHGPGNWRGIP 41 79**********************9997 PP | |||||||
2 | Myb_DNA-binding | 28.5 | 3.4e-09 | 112 | 140 | 19 | 48 |
TTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqkyl 48 l+ +W++Ia++++ Rt++++k++w++yl RWW17237.1 112 LPECRWAAIASYLP-ERTDNDIKNYWNTYL 140 45558*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
MGRPPCCDKD GVKKGPWTPE EDIALVSYIQ QHGPGNWRGI PPNTGTVVGE VAKVDKLPEA 60 WDQAWELHRS GGEAYSSSPI SSRQQVENRG GREMMTFDPA SFDSNVLMRV MLPECRWAAI 120 ASYLPERTDN DIKNYWNTYL KKKLRKLESG GADSPIGSLQ SGRRSISKGQ WERCLQTDVD 180 MAKRALSQAL SMEKEWKASS IDRSSLSSRP SSTYASSTEN ISRLLKGWMS GTSSNPGVAQ 240 ASSASVRADT ASSQGSASAS SSNCIMSPEP LESLLGLHDS TPEGSEAQAP LSLLESWLLD 300 EDAGQKQENF LDMATDYM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62470.1 | 3e-54 | MYB family protein |