PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW16263.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 242aa    MW: 27815.1 Da    PI: 8.4591
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW16263.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF58.39.4e-192363343
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                i n+s r+ tf kRr+g++KK +ELS+LCd+++++i+++++
  RWW16263.1 23 IANDSTRKATFKKRRKGLMKKVSELSTLCDVKACMIVYGPQ 63
                89*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MSSIPYVTHT VYMARKKVNL AWIANDSTRK ATFKKRRKGL MKKVSELSTL CDVKACMIVY  60
GPQEPQPEVW PSVPEATRLL ARFKSMPEME QCKKMMNQEE FLRQRVAKLQ EQLRKQVREN  120
RELEVALLVH EGLAGRSLDD VSIEDATSLA WTVEMKAKVV HDRIERVRKE HVAAALRTAE  180
AAVATREKTP VEAAMEALQR QDWFMEVMNP NDHNVMFGGG DETIPSYIDH SSPWLDPYYP  240
LN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11537RKKVNLAWIANDSTRKATFKKRR
23438KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.13e-42M-type_MADS family protein