PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW15721.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C3H

Protein Properties

Length: 716aa MW: 76933 Da PI: 6.313

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW15721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	23.1	1.3e-07	320	340	5	26
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 +C+ f++ GtC++Gd C +aHg RWW15721.1 320 PCPEFRK-GTCRRGDMCEYAHG 340 8****.***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 716 aa Download sequence
MCGGPERIRS SSSSTSQEEK FNSSSRGGGF AGGGMNHLAV EIDDSSSSLL ELAANNDVGA 60 FRRSLDRDPS AVDEVGLWYG REKGSNRMLL QHRTPLMVAA TYGSLGVLEL LLSLPSFVDV 120 SRAAGHDRTT ALHCAASGGS PTAADAVKLL LSAGADSNLV DASDHRPADV VVVPPKLPDM 180 RTVLEELLGR SSNGTCGDHH HRALRTITRL SMSDSLPSSS SLDEDGTPSS DSVSFPATIA 240 KAPELQPPAM VTDKKEYPVD PSLPDIKSSF YATDEFRMYS FKVRPCSRAY SHDWTECPFV 300 HPGENARRRD PRKYHYSCVP CPEFRKGTCR RGDMCEYAHG VFECWLHPAQ YRTRLCKDGT 360 NCSRRVCFFA HTQEELRPLF MSTGSAVPSA SAAMEMAAVM GLMPGSPSSI STVMHPFTSP 420 LSPSGNGTGH SSLAWAQPNV PALHLPGINL KGSRLRTSLS ARDMPLDDFS VMPEFDAQQL 480 LNDWCRTCLS PSMGNQMARL KTLAPSNLDD LFSAEIASSP KYNSDQGAIF SPSHKAAILS 540 QFQQQQQGLL SPSNTVFSPK PMENQLLPGR STLLHASLGV SSPGTMSPRS MEPASPKSSH 600 LALLGQQEKQ QQTLRSLSSR DLGSGTSLVF GSSGNSSWSK WASPSGILDL GVNGEELGRL 660 NRSSSFELQA NGEEPDLSWV HSLVRESPSE EVGTASVAPA WPSSLDPAAD GVEDSN

Sequence ? help Back to Top

Protein Sequence Length: 716 aa Download sequence

MCGGPERIRS SSSSTSQEEK FNSSSRGGGF AGGGMNHLAV EIDDSSSSLL ELAANNDVGA  60
FRRSLDRDPS AVDEVGLWYG REKGSNRMLL QHRTPLMVAA TYGSLGVLEL LLSLPSFVDV  120
SRAAGHDRTT ALHCAASGGS PTAADAVKLL LSAGADSNLV DASDHRPADV VVVPPKLPDM  180
RTVLEELLGR SSNGTCGDHH HRALRTITRL SMSDSLPSSS SLDEDGTPSS DSVSFPATIA  240
KAPELQPPAM VTDKKEYPVD PSLPDIKSSF YATDEFRMYS FKVRPCSRAY SHDWTECPFV  300
HPGENARRRD PRKYHYSCVP CPEFRKGTCR RGDMCEYAHG VFECWLHPAQ YRTRLCKDGT  360
NCSRRVCFFA HTQEELRPLF MSTGSAVPSA SAAMEMAAVM GLMPGSPSSI STVMHPFTSP  420
LSPSGNGTGH SSLAWAQPNV PALHLPGINL KGSRLRTSLS ARDMPLDDFS VMPEFDAQQL  480
LNDWCRTCLS PSMGNQMARL KTLAPSNLDD LFSAEIASSP KYNSDQGAIF SPSHKAAILS  540
QFQQQQQGLL SPSNTVFSPK PMENQLLPGR STLLHASLGV SSPGTMSPRS MEPASPKSSH  600
LALLGQQEKQ QQTLRSLSSR DLGSGTSLVF GSSGNSSWSK WASPSGILDL GVNGEELGRL  660
NRSSSFELQA NGEEPDLSWV HSLVRESPSE EVGTASVAPA WPSSLDPAAD GVEDSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41900.1	0.0	C3H family protein