PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW15610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 108aa MW: 12230.2 Da PI: 10.1274 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.4 | 5.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++lv ++ +G g W + +++ g++R++k+c++rw++yl RWW15610.1 14 RGAWTANEDKILVSYISTHGIGKWGSLPKRAGLKRCGKSCRLRWLNYL 61 89*********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 108 aa Download sequence |
MGRKPCCSKE GLNRGAWTAN EDKILVSYIS THGIGKWGSL PKRAGLKRCG KSCRLRWLNY 60 LRPGIKRGNI SDDEEELIIR LHKLLGNRSF IFPQSTFADS NNYCSLCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 2e-43 | MYB family protein |