PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW15609.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 219aa MW: 23612.4 Da PI: 4.289 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.4 | 9.3e-10 | 24 | 51 | 19 | 47 |
TTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqky 47 G ++W++Ia +++ gRt++++k++w++ RWW15609.1 24 NGDRRWSLIAGRLP-GRTDNEIKNYWNTT 51 57789*********.************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MVNSVGSLLC GFLELVLDKC SFLNGDRRWS LIAGRLPGRT DNEIKNYWNT TLVKRLQGGS 60 SQLPGDPSPG TAQSKGKDTA AAAPQPVTGS KVIQTKALRC TKAFFSQDTT GCMPPRLAPE 120 ESDGCSKISP FGSSLDVVAA FPSSSDAWKE RDDGVQVENP GSKEADDAGN MGFYPDDLMS 180 FDGAMIGNWM ENDQFQQDSM LDVKLLASIL EAEEQVCWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 1e-15 | MYB family protein |