PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW15112.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 198aa MW: 22402.8 Da PI: 9.2983 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.9 | 6.4e-56 | 28 | 155 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdee++++yL +kv ++ +++ ++i evd++k+ePwdLp+k+k +ekewyfF++rd+ky+ g+r+nrat++g+Wkatgkdke+++ +g l RWW15112.1 28 LPPGFRFHPTDEEIITHYLSPKVVNHGFTA-RAIGEVDLNKCEPWDLPSKAKMGEKEWYFFCRRDRKYPGGTRTNRATDAGFWKATGKDKEIYKGRGVL 125 79*************************999.89***************99999********************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfy+gr p+gek++Wvmheyrle RWW15112.1 126 VGMKKTLVFYRGRGPTGEKSNWVMHEYRLE 155 ****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MYCAYFTVLG ATMVDVSEIT KEVGRMELPP GFRFHPTDEE IITHYLSPKV VNHGFTARAI 60 GEVDLNKCEP WDLPSKAKMG EKEWYFFCRR DRKYPGGTRT NRATDAGFWK ATGKDKEIYK 120 GRGVLVGMKK TLVFYRGRGP TGEKSNWVMH EYRLEGTSSS SDLPKAPTVL LPHCQLSYIS 180 VIPLSEESKL VLGRMNGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 1e-81 | NAC family protein |