PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW14854.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 375aa MW: 41392.4 Da PI: 8.6488

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW14854.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	19	66	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +lv+ v+++G g+W+++ r+ g+ R++k+c++rw ++l RWW14854.1 19 KGPWTPAEDAILVEHVRRHGEGNWNAVQRHSGLARCGKSCRLRWANHL 66 79******************************************9986 PP
2	Myb_DNA-binding	50.6	4.4e-16	72	115	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T++E++l++++++qlG++ W++ a+ ++ gRt++++k++w++ RWW14854.1 72 KGSFTPDEELLILRLHAQLGNK-WARMAAQLP-GRTDNEIKNYWNT 115 799*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MKAEIGERGG KKAERGLKKG PWTPAEDAIL VEHVRRHGEG NWNAVQRHSG LARCGKSCRL 60 RWANHLRPNL KKGSFTPDEE LLILRLHAQL GNKWARMAAQ LPGRTDNEIK NYWNTRLKRR 120 QRAGLPIYPP ELQEVVGFDH QLKQQASTLL RTPPPLPPPP SAAECSARLP SLRPAPLLDP 180 AIFRPLSGIT LPPLPQNLFS CHLGFGFPLS PASPPPTPTS LFQPQQQQQQ QLGPGNYEVS 240 RPQRLPSVPW PTPAKMELPS YQLFPEPVGG RDGPTSSGLL EALLQDAHVP DDMKLGELLA 300 LPTVGEQEAV WEHVFFGGDS SEAIKEISQG CSLGSATKLE CLDCNMGEFY RTNPPVSVPC 360 VGNLCIRTTH MRSHD

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MKAEIGERGG KKAERGLKKG PWTPAEDAIL VEHVRRHGEG NWNAVQRHSG LARCGKSCRL  60
RWANHLRPNL KKGSFTPDEE LLILRLHAQL GNKWARMAAQ LPGRTDNEIK NYWNTRLKRR  120
QRAGLPIYPP ELQEVVGFDH QLKQQASTLL RTPPPLPPPP SAAECSARLP SLRPAPLLDP  180
AIFRPLSGIT LPPLPQNLFS CHLGFGFPLS PASPPPTPTS LFQPQQQQQQ QLGPGNYEVS  240
RPQRLPSVPW PTPAKMELPS YQLFPEPVGG RDGPTSSGLL EALLQDAHVP DDMKLGELLA  300
LPTVGEQEAV WEHVFFGGDS SEAIKEISQG CSLGSATKLE CLDCNMGEFY RTNPPVSVPC  360
VGNLCIRTTH MRSHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	4e-71	MYB family protein