PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW14020.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 355aa MW: 39619.9 Da PI: 7.6267

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW14020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.9	2.7e-09	14	45	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd++l+ ++k +G g+W++ ++ g RWW14020.1 14 KGAWTKEEDQKLISYIKAHGEGCWRSLPKAAG 45 79***********************9998766 PP
2	Myb_DNA-binding	57.5	3e-18	91	135	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ +lG++ W++Ia +++ gRt++++k++w+++ RWW14020.1 91 RGNFTEEEDELIIKLHGLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 135 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDQKLISYIK AHGEGCWRSL PKAAGPPLEH PVLCCHPAFA 60 YASVLVCTGL LRCGKSCRLR WINYLRPDLK RGNFTEEEDE LIIKLHGLLG NKWSLIAGRL 120 PGRTDNEIKN YWNTHIKRKL LSRGIDPQTH GPINGGATAA FPAPHPPETA VPKASATDSY 180 DETNSSGGSQ DDDQDGYLDL NLALSISLPH RSPKRPQPSE PLTSAATSSS PQAICLCCHL 240 GFQSSEACSC HTTENPHCFH VLNVVLLRFE LSTTKLAVLC LKWRCARWCC RTAAASKIVY 300 DEEEREWKNI FQRERNGHEI PLLLILSDNG RPHAEHWDTF REHQAYTVST TGHDL

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MGRSPCCEKA HTNKGAWTKE EDQKLISYIK AHGEGCWRSL PKAAGPPLEH PVLCCHPAFA  60
YASVLVCTGL LRCGKSCRLR WINYLRPDLK RGNFTEEEDE LIIKLHGLLG NKWSLIAGRL  120
PGRTDNEIKN YWNTHIKRKL LSRGIDPQTH GPINGGATAA FPAPHPPETA VPKASATDSY  180
DETNSSGGSQ DDDQDGYLDL NLALSISLPH RSPKRPQPSE PLTSAATSSS PQAICLCCHL  240
GFQSSEACSC HTTENPHCFH VLNVVLLRFE LSTTKLAVLC LKWRCARWCC RTAAASKIVY  300
DEEEREWKNI FQRERNGHEI PLLLILSDNG RPHAEHWDTF REHQAYTVST TGHDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	3e-84	MYB family protein