PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW13968.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 173aa MW: 19500.7 Da PI: 5.6907 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.9 | 1.1e-08 | 23 | 69 | 2 | 48 |
SSS-H.HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTt.eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 gr+T+ eE++ l +++ ++ +W++Iar+++ g t++++k++w++++ RWW13968.1 23 GRMTPqEEHLPLPCGFILMEVLRWSRIARKLP-GCTDNEIKNYWRTHM 69 55665156666999999999889*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
LNRTGKSCRM RWVNYLHPSL KRGRMTPQEE HLPLPCGFIL MEVLRWSRIA RKLPGCTDNE 60 IKNYWRTHMR KRAQEEKRNC SPSATSSAPP ADDLPTRSEV AAESQLNGNG DGGNSYSVDE 120 VWDEIAQSFG DHRDEARGDA CTPLTSATPV WECCSGSPWK TEDEVLDDAL FGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 1e-36 | MYB family protein |