PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW13398.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WOX | ||||||||
Protein Properties | Length: 216aa MW: 23885.8 Da PI: 8.7652 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 49.5 | 7.2e-16 | 23 | 83 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ RWW13398.1 23 RTRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLeqfgSVGDANVFYWFQNRRSRSRR 83 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 108 | 5.5e-35 | 23 | 85 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 rtRWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q RWW13398.1 23 RTRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEQFGSVGDANVFYWFQNRRSRSRRRQ 85 79***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MDDQNQDNYG GPNLQRSALE PLRTRWTPKP EQILILESIF NSGMVNPPKD ETVRIRKLLE 60 QFGSVGDANV FYWFQNRRSR SRRRQRQLQA SLMADPRAAG VVQHAGGAAT SSPSNSPGGG 120 FFACSSSTSA AASSSNFVID DNADDLFSIS RQMGFMEATQ TPPPFMCSSD VSHLHNQPGQ 180 SVHGFGVSDT IWPFLQILHK DMKQRLLGAV LFINNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17810.1 | 3e-33 | WOX family protein |