PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW12874.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YA | ||||||||
Protein Properties | Length: 164aa MW: 17719.9 Da PI: 10.7091 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 104.2 | 1.2e-32 | 16 | 72 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVN+KQy++Il+RRq Ra+le+++k+ +k+rkpylheSRh hA++R RgsgGrF RWW12874.1 16 EEPVYVNPKQYNAILRRRQLRARLEAQNKV-IKTRKPYLHESRHLHAMKRVRGSGGRF 72 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MASSARVVLP AESAAEEPVY VNPKQYNAIL RRRQLRARLE AQNKVIKTRK PYLHESRHLH 60 AMKRVRGSGG RFVNTKQQNS QPSSSKASWN DSCSDPCSCS GLVGLSATST GSDMTTLSTS 120 GRMLMQQDQS CYLEPGFLSS AAATSQGGGR KTGNGSDQRT PAVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54160.1 | 3e-25 | NF-YA family protein |