PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW12671.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 246aa MW: 28452.4 Da PI: 9.9835 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.6 | 1.1e-16 | 30 | 77 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ ++ +G g+W++ ++ g+ R++k+c++rw +yl RWW12671.1 30 KGAWTKEEDERLIAHIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 77 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 57.7 | 2.7e-18 | 83 | 151 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT.......................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.......................tWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ +lG++ +W++Ia++++ gRt++++k++w+++ RWW12671.1 83 RGNFTEEEDELIIKLHSLLGNKyvfdqltartpldaeltdsvprcRWSLIAARLP-GRTDNEIKNHWNTH 151 89*****************************************************.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MTRDVAAREK KKKKKNMGRS PCCEKAHTNK GAWTKEEDER LIAHIRVHGE GCWRSLPKAA 60 GLLRCGKSCR LRWINYLRPD LKRGNFTEEE DELIIKLHSL LGNKYVFDQL TARTPLDAEL 120 TDSVPRCRWS LIAARLPGRT DNEIKNHWNT HIRRKLLSRG VDPATHRPVN HRPPSNNITI 180 SFERREESSG WQQQQQQQQT QRPDLNLELC ISLPFQQEPH ELTEREKSLC FRGASAKTSL 240 ASAMEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 1e-85 | MYB family protein |