PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW12244.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 297aa MW: 33438.1 Da PI: 8.1705

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW12244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.6	1.6e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l+ + G +W+++++ g+ R++k+c++rw +yl RWW12244.1 14 KGPWSAEEDKKLISFILTKGHCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	33.9	7.5e-11	70	173	4	47
S-HHHHHHHHHHHHHTTTT.............................................................-HHHHHHHHTTTS- CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg.............................................................tWktIartmgkgRt 36 ++ E++l +d++++lG++ +W++Ia++++ gRt RWW12244.1 70 LSPAEEQLVIDLHARLGNRfsllfslnshlflcfscvlrhhilqrsisgyrsssdhcslllrfklttsmlhdnylnltpcRWSKIAAMLP-GRT 162 5899************************************************************************************.* PP HHHHHHHHHHH CS Myb_DNA-binding 37 lkqcksrwqky 47 ++++k+ w+++ RWW12244.1 163 DNEIKNLWNTH 173 ********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MGRRPCCDKL GVKKGPWSAE EDKKLISFIL TKGHCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SPAEEQLVID LHARLGNRFS LLFSLNSHLF LCFSCVLRHH ILQRSISGYR 120 SSSDHCSLLL RFKLTTSMLH DNYLNLTPCR WSKIAAMLPG RTDNEIKNLW NTHIKKKLVK 180 MGVDPVTHKP LDKQANSVSS QSTATTESKS DRPLQSRGTD GQIQSSENTS SPTETSSNTD 240 GADPLLSCLW EDNTSLLDEL WQFPSNEDVD YSSVAGQVLP WDEGSCEWMM LDDQALG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	4e-53	MYB family protein