PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW12201.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family BBR-BPC
Protein Properties Length: 297aa    MW: 32936.5 Da    PI: 10.5595
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW12201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind315.41.8e-9612971301
   GAGA_bind   1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdaki.......rernlalsekka.avaerd..........maflqrdkalaernkalverdnk 80 
                 mdddg    rn+g+yep   +k nlgl+lm s++erdak+         r+  + e++  +   rd           + l rd ++++      + ++k
  RWW12201.1   1 MDDDGGLGiRNWGFYEPP--MKGNLGLRLMPSVTERDAKPllssggfLRRHCGIPEPSVpPNFVRDgwrhhgndgsKNDLLRDGWIHH-----NNDNDK 92 
                 999999999*********..********************888887744444444443313345557777777788666689999999.....455788 PP

   GAGA_bind  81 llalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvk 179
                  +++l+v+++    + +g++v+++ +++++l++l++p+ +      ++++k+++++     + ak+++  kkr+r++ +k++k kk+kk   ++ ++v 
  RWW12201.1  93 NFHILPVNHQ----HHPGYGVIPDPSNVHNLHMLQHPEPQ------PKHDKVSTME----GNGAKNESPLKKRSRGRPQKSPKPKKPKK-AVAPSDDVL 176
                 8999998885....55799**********99996554333......3333232222....34455566667788999999999999999.445556665 PP

   GAGA_bind 180 kesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGyd 278
                 + s  ++ k  +ks+++v+ng+++D+s++P+PvCsCtG+++qCY+WG GGWqSaCCtt+iS++PLP+stkrrgaRiagrKmSqgafkk+LekLa+eGy+
  RWW12201.1 177 NGSL-SHGKGGRKSTGMVINGIDFDISRIPTPVCSCTGKPQQCYRWGIGGWQSACCTTSISMHPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGYN 274
                 5554.799******************************************************************************************* PP

   GAGA_bind 279 lsnpvDLkdhWAkHGtnkfvtir 301
                 l np+DL+++WAkHGtnk+vtir
  RWW12201.1 275 LTNPIDLRTFWAKHGTNKYVTIR 297
                 **********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MDDDGGLGIR NWGFYEPPMK GNLGLRLMPS VTERDAKPLL SSGGFLRRHC GIPEPSVPPN  60
FVRDGWRHHG NDGSKNDLLR DGWIHHNNDN DKNFHILPVN HQHHPGYGVI PDPSNVHNLH  120
MLQHPEPQPK HDKVSTMEGN GAKNESPLKK RSRGRPQKSP KPKKPKKAVA PSDDVLNGSL  180
SHGKGGRKST GMVINGIDFD ISRIPTPVCS CTGKPQQCYR WGIGGWQSAC CTTSISMHPL  240
PMSTKRRGAR IAGRKMSQGA FKKVLEKLAG EGYNLTNPID LRTFWAKHGT NKYVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-76BBR-BPC family protein