PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW11807.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 245aa MW: 27472.8 Da PI: 6.2762 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 22.4 | 2.4e-07 | 115 | 157 | 22 | 59 |
EEEEEE-ST...T---EEEEEE-SS..STTEEEEEEES--SS- CS WRKY 22 rsYYrCtsa...gCpvkkkversae..dpkvveitYegeHnhe 59 r+YYrC ++ gC +kk v r ++ d + + Y+ +H+++ RWW11807.1 115 RNYYRCVFRdkqGCLAKKTVHRVDNfgDSPRFSVEYRATHTCK 157 9******998889*********886448889**********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MKEKKTAPRH ESAGPSACNH SMAIQDINRA LELLSQLHAV LLQLHPSNGG DMLEEIRRFT 60 SRAVSRLQSC VCGSSVASED SLRDMYGNGK RKSLKTSWFS QYINSGCNAC FHGHRNYYRC 120 VFRDKQGCLA KKTVHRVDNF GDSPRFSVEY RATHTCKTID VVLPSVMESA PKEASVHASG 180 FRCTLEPQEN HLSPLAHAAI EAQDEGLWIS DQAQDCELLG SDMMATEPWD LDMFLEDDDG 240 WYNVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.2 | 8e-11 | WRKY family protein |