PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW10988.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 302aa    MW: 32955.1 Da    PI: 5.6967
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW10988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.32.2e-12197222126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 y   +C+++ +tG+C yGd+CkF+H+
  RWW10988.1 197 YQPDICKDYKETGYCGYGDSCKFMHD 222
                 67789********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MAESGEVCNF FRKPTKNKNI RKRKNTGSDD EDGAADDAPS TVPAIVKSKK SATDNKLMFS  60
SSSSKPSSKP SADSGAAGDP DEDAGERSSG ALFQFESSKE IQVQHDSRAT AVLETETEFS  120
KDARAIRERV LKQAEETLKG KSKAGGGDDK VYKGIHGYTD YKAGFRREQT VAGEKAGGAH  180
GPLRASAHIR LSARFDYQPD ICKDYKETGY CGYGDSCKFM HDRGDYKSGW QLEKEWEEAE  240
KARKRGLAAG GGGGDGDDGD HEADDDDDDS LPFACFICRQ PFEDPVVTKC KHYFCEHCAL  300
KV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12149RKRKNTGSDDEDGAADDAPSTVPAIVKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.13e-95C3H family protein