PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW08857.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 25898.3 Da PI: 7.4536 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.8 | 2.7e-18 | 59 | 107 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++G+r+++ +g+W+AeIrdp+ + r++lg+f taeeAa+a+++ +++++g RWW08857.1 59 FRGIRQRP-WGKWAAEIRDPV----KgVRVWLGTFATAEEAARAYDREARRIRG 107 79******.**********75....44************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 233 aa Download sequence |
MCGGAIISDF IPPRNHHRRR RPNPDNLLSA SDLWPNSHES LHVPVQDKVP RKRERKNMFR 60 GIRQRPWGKW AAEIRDPVKG VRVWLGTFAT AEEAARAYDR EARRIRGKKA KVNFPNEVQP 120 GDVDQSVPCN PARTSMEPKL EKAPSPAVAD GGDAEVRRLS EELMAYECYM NFFGIPYMEG 180 GSAAEASLPP DKGPEAAQVG VTESATEVCN PPVSSGTEML WSFEDILPTS YGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47520.1 | 1e-35 | ERF family protein |