PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW08731.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 245aa MW: 28335 Da PI: 6.5796 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.6 | 1.4e-13 | 3 | 45 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ lv+ v+++G ++W+ Ia+ g k+c++rw +yl RWW08731.1 3 KGPWTEQEDLHLVCFVRLFGERRWDFIAKVSG-----KSCRLRWVNYL 45 79******************************.....*********97 PP | |||||||
2 | Myb_DNA-binding | 51.4 | 2.5e-16 | 51 | 95 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T++E l +++++++G++ W++Iar+++ gRt++++k++w+ + RWW08731.1 51 RGRMTPQEKHLVLELHALWGNR-WSRIARKLP-GRTDNEIKNYWRAH 95 89********************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MRKGPWTEQE DLHLVCFVRL FGERRWDFIA KVSGKSCRLR WVNYLHPGLK RGRMTPQEKH 60 LVLELHALWG NRWSRIARKL PGRTDNEIKN YWRAHMRKMT KERKRSSSSS RVDHSLDLTE 120 LPLQAAAEAH DLKSTTSASS CCLTAEELEK KEEGVASYSL DQIWNEIATS EVINELSFED 180 SCPLMPSSPT WECCSEAVWK IDDDEELRML LETDHLISTH NDGGRETCSL AHQPDHFSFS 240 PMYSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 1e-65 | MYB family protein |