PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08674.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 508aa MW: 55633.4 Da PI: 9.7938

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.3	8.5e-19	151	195	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+W++eEde l ++v+++G+++W++I++ ++ gR++k+c++rw + RWW08674.1 151 GPWSQEEDEALQRLVQRHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 195 89***************************.*********985 PP
2	Myb_DNA-binding	54	4e-17	204	246	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde++v+a+++ G++ W+tIar + gRt++ +k++w++ RWW08674.1 204 PFTAEEDEIIVRAHRRVGNK-WATIARLLS-GRTDNAIKNHWNST 246 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MVLVSDARQR AVTGSRHYFP YVDRKRGGLT DGGCVGAAGK RARTSTRIFS TRRGRVSRCR 60 GSMCEEEEKD ERAQKACNEM ATRVQRQLYA IANETGSGRE RPPLRRSPPT QVPLPLYKTP 120 SEALHLLLRW GSLDPMAAAM GSRKDVDKIT GPWSQEEDEA LQRLVQRHGP RNWSLISKSI 180 PGRSGKSCRL RWCNQLSPQV EHRPFTAEED EIIVRAHRRV GNKWATIARL LSGRTDNAIK 240 NHWNSTLKRK YSTACSVDEE LQYRYDAIMA DKEAAAHRED EAVATRPLKR ASSDGLTLLS 300 GGAGLCLSPG SPSRSDLSDS SHHSHSLISP PAAAASHIYQ PFPRTGGVVT LSFSPTRHHH 360 HGGPITAAAD PTSLKNDDGP TTFLTLSLPG SDQTHTSSHR QVQTGANTSS QNQLQPLPSS 420 AHASHQMMQR CSPTATSPSG GARIPSADDE RRPAPFSFSG EFIAVMQEMI RSEVRSYMAE 480 LEQGRMVCGT QPPPCNAAAK RIGVTDAE

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MVLVSDARQR AVTGSRHYFP YVDRKRGGLT DGGCVGAAGK RARTSTRIFS TRRGRVSRCR  60
GSMCEEEEKD ERAQKACNEM ATRVQRQLYA IANETGSGRE RPPLRRSPPT QVPLPLYKTP  120
SEALHLLLRW GSLDPMAAAM GSRKDVDKIT GPWSQEEDEA LQRLVQRHGP RNWSLISKSI  180
PGRSGKSCRL RWCNQLSPQV EHRPFTAEED EIIVRAHRRV GNKWATIARL LSGRTDNAIK  240
NHWNSTLKRK YSTACSVDEE LQYRYDAIMA DKEAAAHRED EAVATRPLKR ASSDGLTLLS  300
GGAGLCLSPG SPSRSDLSDS SHHSHSLISP PAAAASHIYQ PFPRTGGVVT LSFSPTRHHH  360
HGGPITAAAD PTSLKNDDGP TTFLTLSLPG SDQTHTSSHR QVQTGANTSS QNQLQPLPSS  420
AHASHQMMQR CSPTATSPSG GARIPSADDE RRPAPFSFSG EFIAVMQEMI RSEVRSYMAE  480
LEQGRMVCGT QPPPCNAAAK RIGVTDAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	6e-72	MYB family protein