PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW08533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | C2H2 | ||||||||
Protein Properties | Length: 197aa MW: 21606.9 Da PI: 10.31 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.8 | 0.00036 | 100 | 122 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+ F++ L H +H RWW08533.1 100 FQCKTCGRQFPTFQALGGHRTSH 122 89**********99998888777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MRSTAWSSSI IVLVMDEDQL ICLGHPLVAL QVCVCCVPSP RVASASKEIE VKPAPRVEAS 60 SGCSRKRGMD SEEAELLLSL SLGVKPGKRR RRTKAADGVF QCKTCGRQFP TFQALGGHRT 120 SHKRPYSEHR CFLSGAGFAM GRALGGQCGR HKATGDKEPK QRNQKKKPDT DMAPLEFNLS 180 EVVRRSSSHS QLLQLFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59820.1 | 4e-14 | C2H2 family protein |