PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08346.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 418aa MW: 45215.2 Da PI: 6.9428

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.2	3.1e-13	251	296	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ +++Ka+ L Av YI++L RWW08346.1 251 THVEAERQRREKLNNRFYALRSVVPNV-----SRMDKASLLADAVTYIQDL 296 8***********************6.....4**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MEELPVISPS SSSPPLSFHQ PAPATELQRR LQCLLQARPE WWAYAIFWRA SPDHRVLSFG 60 DGHFRGARCL PDRRSRGCDA ADEAGADAVD DAEWFYIMSL SRSFVGDGAI PARVYGSLEP 120 LWLTGAHALQ ACGCDRSREA QLHGIQTLAC VPVPGGVLEL GSPDLIGDNW VLVHQAKAVF 180 SEGPNDVSPT AGAALAAVAF PSPAVRKEGA GLSSSVDSEH SDSEGGMTVE RRRPKKRGRK 240 PGSLSRDCTS THVEAERQRR EKLNNRFYAL RSVVPNVSRM DKASLLADAV TYIQDLKAKV 300 ESLEAETKMA KKEPAADQAA TSSTNAASAT TSSPATVAIE MEVKLLGKDA LIRVQSEDQN 360 HPPARLMCAL RDLELSVHHA SVSTLKDVVL QDVVVKVPTE LQVEHALRAA LLARLQRS

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MEELPVISPS SSSPPLSFHQ PAPATELQRR LQCLLQARPE WWAYAIFWRA SPDHRVLSFG  60
DGHFRGARCL PDRRSRGCDA ADEAGADAVD DAEWFYIMSL SRSFVGDGAI PARVYGSLEP  120
LWLTGAHALQ ACGCDRSREA QLHGIQTLAC VPVPGGVLEL GSPDLIGDNW VLVHQAKAVF  180
SEGPNDVSPT AGAALAAVAF PSPAVRKEGA GLSSSVDSEH SDSEGGMTVE RRRPKKRGRK  240
PGSLSRDCTS THVEAERQRR EKLNNRFYAL RSVVPNVSRM DKASLLADAV TYIQDLKAKV  300
ESLEAETKMA KKEPAADQAA TSSTNAASAT TSSPATVAIE MEVKLLGKDA LIRVQSEDQN  360
HPPARLMCAL RDLELSVHHA SVSTLKDVVL QDVVVKVPTE LQVEHALRAA LLARLQRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	240	RRPKKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	4e-35	bHLH family protein