PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08226.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 228aa MW: 25864.3 Da PI: 8.2201

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.1	6.4e-11	8	50	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv v+++G ++W+ a+ g k+c++rw +yl RWW08226.1 8 KGPWTEQEDLQLVWFVRLFGERRWDILAKVTG-----KSCRLRWVNYL 50 79****************************.....*******97 PP
2	Myb_DNA-binding	26.3	1.7e-08	56	116	1	47
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT.........TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg.........kgRtlkqcksrwqky 47 rgr T++E+ l +d+++++G++ + ++ +r + Rt++++k++w+++ RWW08226.1 56 RGRLTPQEERLVLDLHAKWGNRsdrspRASLLPRLSQsqiflvrsvAWRTDNEIKNYWRTH 116 899**********************999999999999******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MEATQPRKGP WTEQEDLQLV WFVRLFGERR WDILAKVTGK SCRLRWVNYL HPGLRRGRLT 60 PQEERLVLDL HAKWGNRSDR SPRASLLPRL SQSQIFLVRS VAWRTDNEIK NYWRTHTRRK 120 AQERNRSSCP SPSSSSVDPG IEKPGGGSVA GSSSLISGLG VTVEVAKGYT MDQIWNEIAA 180 SESASGLSFE EEQDCCPPMP CSMWGVDDED TRMLNPMPPL LAFPPHEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	4e-52	MYB family protein