PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08169.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 302aa MW: 34058.5 Da PI: 8.3804

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08169.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.8	3.2e-10	38	82	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 +g+WT+eEd+ l+ +++ +G ++W++ +++ g l +c++r+ RWW08169.1 38 KGPWTAEEDQVLIAYIQHHGHENWRALPKRAGnHSYRLHSCVLRL 82 79******************************5222356666665 PP
2	Myb_DNA-binding	53.7	4.9e-17	121	166	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+e ++++++ lG++ W++Ia++++ gRt++++k+ w+++l RWW08169.1 121 RGNFTKEEEEAIIKLHEVLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 166 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MLSILPPPWI GKQREEEKRG RQSEMVRAPC CEKMGLKKGP WTAEEDQVLI AYIQHHGHEN 60 WRALPKRAGN HSYRLHSCVL RLREDVLLFD VFGLLSTPGL LRCGKSCRLR WTNYLRPDIK 120 RGNFTKEEEE AIIKLHEVLG NRWSAIAARL PGRTDNEIKN VWHTHLKKRV KPNQTAQESK 180 RSSRRDAEAT RSGAKAINFQ ALQAAARPKL ESPTPPPVSL DHSYSEISSS VTSSSNKRGE 240 TVSGGIKEEV MVSSAQFSDI DQSFWLDDSF ASFCSSGGDK DDGIDFWLQV FMEAGDAEEI 300 NA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	3e-71	MYB family protein