PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW07651.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 721aa MW: 80793.5 Da PI: 8.5855

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW07651.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	601	624	1	22
EEET..TTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt 22 y+C C++sFs+k +L H r RWW07651.1 601 YTCDieGCSMSFSTKQDLALHKRD 624 99*******************985 PP
2	zf-C2H2	13.6	0.00021	626	648	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H ++H RWW07651.1 626 CPvkGCGKKFFSHKYLVQHRKVH 648 9999*****************99 PP
3	zf-C2H2	12.1	0.00058	684	710	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H RWW07651.1 684 YVCWesGCGQTFRFVSDFSRHKRKtgH 710 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 721 aa Download sequence
MDDNIVYCTA YPVQVSDQSV EMISDVTCPS GASALDLLAS IYEDSSDDED VLHEKSRCSD 60 KNDLGKDSSS CNGNQPFVTA AEPQIIYSRE VECDQTYWHL AGADNQTDMS IQSSHSADIS 120 DNLNGHISAV CQIESEFCSP DQPENGKLVS AVYLEDNRAV ANSGTSTKFV GEPRGTQCRD 180 LSTSVFKHAE DHYSSLKMGN LTSVFKDLPV NRDICGNRIV PVKTALVHPE LRNVDIKLMC 240 STALVMQGSD KDSSRLHVFC LEHAAEIEKQ LQPIGGVHMM LLCHPVCDFF LDVVCDLPIM 300 TYADYPKIES EAKLLAKEQG IGYIWKNVKF REANEEDQER TRAAIEDEQV MPMNSDWTVK 360 LGINLCYTAN LSKSSLYSKQ MPYNPVIYKA FGRNSTGNTP VKPKATRRCP GRQKKIVVAG 420 RWCGKVWMSN QVHPYLAHKK ETQEQEQTEE LYAFDTDQKP LIEIDISHSS GLSSKRNLSG 480 SNLAANNSGK KRKRPSKMAK SQKPLYSTIA DRNSKTEDVS AIPASPLGRT LRSSHLRHND 540 SSSQGKSSLK NELGGPGTHV KKRSSKSEEL KNKLASKESI KRKAKNTRTA SLAVKRKEEE 600 YTCDIEGCSM SFSTKQDLAL HKRDICPVKG CGKKFFSHKY LVQHRKVHMD DRPLVCPWKG 660 CKMTFKWPWA RTEHIRVHTG DRPYVCWESG CGQTFRFVSD FSRHKRKTGH SAKKGRRRPG 720 L

Sequence ? help Back to Top

Protein Sequence Length: 721 aa Download sequence

MDDNIVYCTA YPVQVSDQSV EMISDVTCPS GASALDLLAS IYEDSSDDED VLHEKSRCSD  60
KNDLGKDSSS CNGNQPFVTA AEPQIIYSRE VECDQTYWHL AGADNQTDMS IQSSHSADIS  120
DNLNGHISAV CQIESEFCSP DQPENGKLVS AVYLEDNRAV ANSGTSTKFV GEPRGTQCRD  180
LSTSVFKHAE DHYSSLKMGN LTSVFKDLPV NRDICGNRIV PVKTALVHPE LRNVDIKLMC  240
STALVMQGSD KDSSRLHVFC LEHAAEIEKQ LQPIGGVHMM LLCHPVCDFF LDVVCDLPIM  300
TYADYPKIES EAKLLAKEQG IGYIWKNVKF REANEEDQER TRAAIEDEQV MPMNSDWTVK  360
LGINLCYTAN LSKSSLYSKQ MPYNPVIYKA FGRNSTGNTP VKPKATRRCP GRQKKIVVAG  420
RWCGKVWMSN QVHPYLAHKK ETQEQEQTEE LYAFDTDQKP LIEIDISHSS GLSSKRNLSG  480
SNLAANNSGK KRKRPSKMAK SQKPLYSTIA DRNSKTEDVS AIPASPLGRT LRSSHLRHND  540
SSSQGKSSLK NELGGPGTHV KKRSSKSEEL KNKLASKESI KRKAKNTRTA SLAVKRKEEE  600
YTCDIEGCSM SFSTKQDLAL HKRDICPVKG CGKKFFSHKY LVQHRKVHMD DRPLVCPWKG  660
CKMTFKWPWA RTEHIRVHTG DRPYVCWESG CGQTFRFVSD FSRHKRKTGH SAKKGRRRPG  720
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	2e-61	C2H2 family protein