PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW06002.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 323aa MW: 35062.4 Da PI: 7.9358

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW06002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.3	1.8e-18	5	50	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+ eEde l ++v+++G+++W++I+r ++ gR++k+c++rw + RWW06002.1 5 KGPWSIEEDEALRRLVERHGPRNWTLISRSIP-GRSGKSCRLRWCNQ 50 79****************************.*********985 PP
2	Myb_DNA-binding	54.2	3.3e-17	59	101	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a+++ G++ W+tIar + gRt++ +k++w++ RWW06002.1 59 PFTPEEDETIIRAHRRVGNK-WATIARLLS-GRTDNAIKNHWNST 101 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MDRIKGPWSI EEDEALRRLV ERHGPRNWTL ISRSIPGRSG KSCRLRWCNQ LSPQVEHRPF 60 TPEEDETIIR AHRRVGNKWA TIARLLSGRT DNAIKNHWNS TLKRKCTPTT FAAAADCAGG 120 SALALDRDEE TVARPLKRAS SVGPVLASAS AQLCLSPGSP TGSDLSDSSH HDHPAAAASC 180 IYRPVPRTAG VTVPPSASPS TATFQEQDLK TEATGISCTA SPSSYPKDDP LTSLTLSLPG 240 SDRIVTSNQI HQCPDAKTGD DRPPHPPFQF SAELLAVMQE MIRSEVRSYM SCLEQHGITR 300 PQPPPEAAIC DAAPKRIGLT NID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	1e-72	MYB family protein